2OPZ image
Deposition Date 2007-01-30
Release Date 2007-02-20
Last Version Date 2024-11-20
Entry Detail
PDB ID:
2OPZ
Title:
AVPF bound to BIR3-XIAP
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
I 21 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Baculoviral IAP repeat-containing protein 4
Gene (Uniprot):XIAP
Chain IDs:A, B, C, D
Chain Length:109
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure-activity based study of the Smac-binding pocket within the BIR3 domain of XIAP.
Bioorg.Med.Chem. 15 2935 2943 (2007)
PMID: 17336535 DOI: 10.1016/j.bmc.2007.02.010

Abstact

A small series of peptide mimics was designed and synthesized to contain a heterocyclic ring in place of the potentially labile N-terminal peptide bond of the tetrapeptide containing the Smac-XIAP-binding motif. Two Smac mimics were shown to bind to the BIR3 domain of XIAP with moderate affinity and one displayed increased activity in cells relative to the Smac peptides. The structures of BIR3-XIAP in complex with a Smac peptide and a peptide mimic were solved and analyzed to elucidate the structure-activity relationship surrounding the Smac-binding domain within BIR3-XIAP.

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Primary Citation of related structures