2OPC image
Deposition Date 2007-01-29
Release Date 2007-03-06
Last Version Date 2023-12-27
Entry Detail
PDB ID:
2OPC
Title:
Structure of Melampsora lini avirulence protein, AvrL567-A
Biological Source:
Source Organism:
Melampsora lini (Taxon ID: 5261)
Method Details:
Experimental Method:
Resolution:
1.43 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:AvrL567-A
Gene (Uniprot):AvrL567-A
Chain IDs:A
Chain Length:127
Number of Molecules:1
Biological Source:Melampsora lini
Primary Citation
The use of Co2+ for crystallization and structure determination, using a conventional monochromatic X-ray source, of flax rust avirulence protein.
Acta Crystallogr.,Sect.F 63 209 213 (2007)
PMID: 17329816 DOI: 10.1107/S1744309107004599

Abstact

Metal-binding sites are ubiquitous in proteins and can be readily utilized for phasing. It is shown that a protein crystal structure can be solved using single-wavelength anomalous diffraction based on the anomalous signal of a cobalt ion measured on a conventional monochromatic X-ray source. The unique absorption edge of cobalt (1.61 A) is compatible with the Cu K alpha wavelength (1.54 A) commonly available in macromolecular crystallography laboratories. This approach was applied to the determination of the structure of Melampsora lini avirulence protein AvrL567-A, a protein with a novel fold from the fungal pathogen flax rust that induces plant disease resistance in flax plants. This approach using cobalt ions may be applicable to all cobalt-binding proteins and may be advantageous when synchrotron radiation is not readily available.

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Primary Citation of related structures