2ONG image
Deposition Date 2007-01-23
Release Date 2007-03-06
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2ONG
Keywords:
Title:
Crystal Structure of of limonene synthase with 2-fluorogeranyl diphosphate (FGPP).
Biological Source:
Source Organism:
Mentha spicata (Taxon ID: 29719)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.24
R-Value Work:
0.20
Space Group:
I 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:4S-limonene synthase
Mutations:E57M
Chain IDs:A, B
Chain Length:543
Number of Molecules:2
Biological Source:Mentha spicata
Primary Citation
Structure of limonene synthase, a simple model for terpenoid cyclase catalysis.
Proc.Natl.Acad.Sci.Usa 104 5360 5365 (2007)
PMID: 17372193 DOI: 10.1073/pnas.0700915104

Abstact

The crystal structure of (4S)-limonene synthase from Mentha spic ata, a metal ion-dependent monoterpene cyclase that catalyzes the coupled isomerization and cyclization of geranyl diphosphate, is reported at 2.7-A; resolution in two forms liganded to the substrate and intermediate analogs, 2-fluorogeranyl diphosphate and 2-fluorolinalyl diphosphate, respectively. The implications of these findings are described for domain interactions in the homodimer and for changes in diphosphate-metal ion coordination and substrate binding conformation in the course of the multistep reaction.

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