2OJF image
Deposition Date 2007-01-12
Release Date 2007-03-20
Last Version Date 2023-12-27
Entry Detail
PDB ID:
2OJF
Keywords:
Title:
Crystal structure of Protein Kinase A in complex with Pyridine-Pyrazolopyridine based inhibitors
Biological Source:
Source Organism:
Bos taurus (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.29
R-Value Work:
0.26
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:cAMP-dependent protein kinase, alpha-catalytic subunit
Gene (Uniprot):PRKACA
Chain IDs:A (auth: E)
Chain Length:351
Number of Molecules:1
Biological Source:Bos taurus
Ligand Molecules
Primary Citation
Design and synthesis of pyridine-pyrazolopyridine-based inhibitors of protein kinase B/Akt.
Bioorg.Med.Chem. 15 2441 2452 (2007)
PMID: 17258463 DOI: 10.1016/j.bmc.2007.01.010

Abstact

Thr-211 is one of three different amino acid residues in the kinase domain of protein kinase B/Akt as compared to protein kinase A (PKA), a closely related analog in the same AGC family. In an attempt to improve the potency and selectivity of our indazole-pyridine series of Akt inhibitors over PKA, efforts have focused on the incorporation of a chemical functionality to interact with the hydroxy group of Thr-211. Several substituents including an oxygen anion, amino, and nitro groups have been introduced at the C-6 position of the indazole scaffold, leading to a significant drop in Akt potency. Incorporation of a nitrogen atom into the phenyl ring at the same position (i.e., 9f) maintained the Akt activity and, in some cases, improved the selectivity over PKA. The structure-activity relationships of the new pyridine-pyrazolopyridine series of Akt inhibitors and their structural features when bound to PKA are also discussed.

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