2OFQ image
Deposition Date 2007-01-04
Release Date 2007-01-23
Last Version Date 2023-12-27
Entry Detail
PDB ID:
2OFQ
Title:
NMR Solution Structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TraO
Gene (Uniprot):traO
Chain IDs:A
Chain Length:95
Number of Molecules:1
Biological Source:IncN plasmid R46
Polymer Type:polypeptide(L)
Molecule:TraN
Gene (Uniprot):traN
Chain IDs:B
Chain Length:22
Number of Molecules:1
Biological Source:IncN plasmid R46
Ligand Molecules
Primary Citation
NMR structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system
Proc.Natl.Acad.Sci.Usa 104 1673 1678 (2007)
PMID: 17244707 DOI: 10.1073/pnas.0609535104

Abstact

Type IV secretion (T4S) systems translocate DNA and protein effectors through the double membrane of Gram-negative bacteria. The paradigmatic T4S system in Agrobacterium tumefaciens is assembled from 11 VirB subunits and VirD4. Two subunits, VirB9 and VirB7, form an important stabilizing complex in the outer membrane. We describe here the NMR structure of a complex between the C-terminal domain of the VirB9 homolog TraO (TraO(CT)), bound to VirB7-like TraN from plasmid pKM101. TraO(CT) forms a beta-sandwich around which TraN winds. Structure-based mutations in VirB7 and VirB9 of A. tumefaciens show that the heterodimer interface is conserved. Opposite this interface, the TraO structure shows a protruding three-stranded beta-appendage, and here, we supply evidence that the corresponding region of VirB9 of A. tumefaciens inserts in the membrane and protrudes extracellularly. This complex structure elucidates the molecular basis for the interaction between two essential components of a T4S system.

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