2O5V image
Deposition Date 2006-12-06
Release Date 2007-02-06
Last Version Date 2023-12-27
Entry Detail
PDB ID:
2O5V
Title:
Recombination mediator RecF
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.61 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA replication and repair protein recF
Gene (Uniprot):recF
Chain IDs:A
Chain Length:359
Number of Molecules:1
Biological Source:Deinococcus radiodurans
Ligand Molecules
Primary Citation
Structural conservation of RecF and Rad50: implications for DNA recognition and RecF function.
Embo J. 26 867 877 (2007)
PMID: 17255941 DOI: 10.1038/sj.emboj.7601537

Abstact

RecF, together with RecO and RecR, belongs to a ubiquitous group of recombination mediators (RMs) that includes eukaryotic proteins such as Rad52 and BRCA2. RMs help maintain genome stability in the presence of DNA damage by loading RecA-like recombinases and displacing single-stranded DNA-binding proteins. Here, we present the crystal structure of RecF from Deinococcus radiodurans. RecF exhibits a high degree of structural similarity with the head domain of Rad50, but lacks its long coiled-coil region. The structural homology between RecF and Rad50 is extensive, encompassing the ATPase subdomain and the so-called 'Lobe II' subdomain of Rad50. The pronounced structural conservation between bacterial RecF and evolutionarily diverged eukaryotic Rad50 implies a conserved mechanism of DNA binding and recognition of the boundaries of double-stranded DNA regions. The RecF structure, mutagenesis of conserved motifs and ATP-dependent dimerization of RecF are discussed with respect to its role in promoting presynaptic complex formation at DNA damage sites.

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Primary Citation of related structures