2O39 image
Deposition Date 2006-12-01
Release Date 2007-01-09
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2O39
Keywords:
VIRAL PROTEIN/immune system
Title:
Human Adenovirus type 11 knob in complex with domains SCR1 and SCR2 of CD46 (membrane cofactor protein, MCP)
Biological Source:
Source Organism:
Human adenovirus 11p (Taxon ID: 343462)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.85 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 3
2O39 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fiber protein
Gene (Uniprot):L5
Chain IDs:A, B
Chain Length:197
Number of Molecules:2
Biological Source:Human adenovirus 11p
UniProt ID:P35774 Pfam ID:PF00541
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Membrane cofactor protein
Gene (Uniprot):CD46
Chain IDs:C, D
Chain Length:126
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P15529 Pfam ID:PF00084
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN C ASN GLYCOSYLATION SITE
Ligand Molecules
CA
Primary Citation
Adenovirus type 11 binding alters the conformation of its receptor CD46.
Nat.Struct.Mol.Biol. 14 164 166 (2007)
PMID: 17220899 DOI: 10.1038/nsmb1190

Abstact

Adenoviruses (Ads) are important human pathogens and valuable gene delivery vehicles. We report here the crystal structure of the species B Ad11 knob complexed with the Ad11-binding region of its receptor CD46. The conformation of bound CD46 differs profoundly from its unbound state, with the bent surface structure straightened into an elongated rod. This mechanism of interaction is likely to be conserved among many pathogens that target CD46 or related molecules.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
1CKL
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