2NXX image
Deposition Date 2006-11-20
Release Date 2007-10-02
Last Version Date 2024-04-03
Entry Detail
PDB ID:
2NXX
Title:
Crystal Structure of the Ligand-Binding Domains of the T.castaneum (Coleoptera) Heterodimer EcrUSP Bound to Ponasterone A
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.75 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ultraspiracle (USP, NR2B4)
Gene (Uniprot):usp
Chain IDs:A, C (auth: B), E (auth: C), G (auth: D)
Chain Length:235
Number of Molecules:4
Biological Source:Tribolium castaneum
Polymer Type:polypeptide(L)
Molecule:Ecdysone Receptor (EcR, NRH1)
Gene (Uniprot):ecr-a
Chain IDs:B (auth: E), D (auth: F), F (auth: G), H
Chain Length:248
Number of Molecules:4
Biological Source:Tribolium castaneum
Ligand Molecules
Primary Citation
Structural and functional characterization of a novel type of ligand-independent RXR-USP receptor.
Embo J. 26 3770 3782 (2007)
PMID: 17673910 DOI: 10.1038/sj.emboj.7601810

Abstact

Retinoid X receptor (RXR) and Ultraspiracle (USP) play a central role as ubiquitous heterodimerization partners of many nuclear receptors. While it has long been accepted that a wide range of ligands can activate vertebrate/mollusc RXRs, the existence and necessity of specific endogenous ligands activating RXR-USP in vivo is still matter of intense debate. Here we report the existence of a novel type of RXR-USP with a ligand-independent functional conformation. Our studies involved Tribolium USP (TcUSP) as representative of most arthropod RXR-USPs, with high sequence homology to vertebrate/mollusc RXRs. The crystal structure of the ligand-binding domain of TcUSP was solved in the context of the functional heterodimer with the ecdysone receptor (EcR). While EcR exhibits a canonical ligand-bound conformation, USP adopts an original apo structure. Our functional data demonstrate that TcUSP is a constitutively silent partner of EcR, and that none of the RXR ligands can bind and activate TcUSP. These findings together with a phylogenetic analysis suggest that RXR-USPs have undergone remarkable functional shifts during evolution and give insight into receptor-ligand binding evolution and dynamics.

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