2NUT image
Deposition Date 2006-11-09
Release Date 2007-05-22
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2NUT
Title:
Crystal Structure of the human Sec23a/24a heterodimer, complexed with the SNARE protein Sec22b
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.26
R-Value Work:
0.21
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein transport protein Sec23A
Gene (Uniprot):SEC23A
Chain IDs:A
Chain Length:769
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein transport protein Sec24A
Gene (Uniprot):SEC24A
Chain IDs:B
Chain Length:753
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Vesicle-trafficking protein SEC22b
Gene (Uniprot):SEC22B
Chain IDs:C
Chain Length:196
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The Transport Signal on Sec22 for Packaging into COPII-Coated Vesicles is a Conformational Epitope
Mol.Cell 26 403 414 (2007)
PMID: 17499046 DOI: 10.1016/j.molcel.2007.03.017

Abstact

The mechanism of cargo concentration into ER-derived vesicles involves interactions between the COPII vesicular coat complex and cargo transport signals--peptide sequences of 10-15 residues. The SNARE protein Sec22 contains a signal that binds the COPII subcomplex Sec23/24 and specifies its endoplasmic reticulum (ER) exit as an unassembled SNARE. The 200 kDa crystal structure of Sec22 bound to Sec23/24 reveals that the transport signal is a folded epitope rather than a conventional short peptide sequence. The NIE segment of the SNARE motif folds against the N-terminal longin domain, and this closed form of Sec22 binds at the Sec23/24 interface. Thus, COPII recognizes unassembled Sec22 via a folded epitope, whereas Sec22 assembly into SNARE complexes would mask the NIE segment. The concept of a conformational epitope as a transport signal suggests packaging mechanisms in which a coat is sensitive to the folded state of a cargo protein or the assembled state of a multiprotein complex.

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Primary Citation of related structures
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