2NUD image
Deposition Date 2006-11-09
Release Date 2007-05-22
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2NUD
Title:
The structure of the type III effector AvrB complexed with a high-affinity RIN4 peptide
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Avirulence B protein
Gene (Uniprot):avrB
Chain IDs:A, B
Chain Length:323
Number of Molecules:2
Biological Source:Pseudomonas syringae pv. glycinea
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RPM1-interacting protein 4
Gene (Uniprot):RIN4
Chain IDs:C, D
Chain Length:35
Number of Molecules:2
Biological Source:
Primary Citation
Type III Effector Activation via Nucleotide Binding, Phosphorylation, and Host Target Interaction.
Plos Pathog. 3 e48 ? (2007)
PMID: 17397263 DOI: 10.1371/journal.ppat.0030048

Abstact

The Pseudomonas syringae type III effector protein avirulence protein B (AvrB) is delivered into plant cells, where it targets the Arabidopsis RIN4 protein (resistance to Pseudomonas maculicula protein 1 [RPM1]-interacting protein). RIN4 is a regulator of basal host defense responses. Targeting of RIN4 by AvrB is recognized by the host RPM1 nucleotide-binding leucine-rich repeat disease resistance protein, leading to accelerated defense responses, cessation of pathogen growth, and hypersensitive host cell death at the infection site. We determined the structure of AvrB complexed with an AvrB-binding fragment of RIN4 at 2.3 A resolution. We also determined the structure of AvrB in complex with adenosine diphosphate bound in a binding pocket adjacent to the RIN4 binding domain. AvrB residues important for RIN4 interaction are required for full RPM1 activation. AvrB residues that contact adenosine diphosphate are also required for initiation of RPM1 function. Nucleotide-binding residues of AvrB are also required for its phosphorylation by an unknown Arabidopsis protein(s). We conclude that AvrB is activated inside the host cell by nucleotide binding and subsequent phosphorylation and, independently, interacts with RIN4. Our data suggest that activated AvrB, bound to RIN4, is indirectly recognized by RPM1 to initiate plant immune system function.

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Primary Citation of related structures