2NT7 image
Entry Detail
PDB ID:
2NT7
Keywords:
Title:
Crystal structure of PTP1B-inhibitor complex
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2006-11-07
Release Date:
2007-04-17
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Tyrosine-protein phosphatase non-receptor type 1
Chain IDs:A
Chain Length:299
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Probing acid replacements of thiophene PTP1B inhibitors.
Bioorg.Med.Chem.Lett. 17 2913 2920 (2007)
PMID: 17336064 DOI: 10.1016/j.bmcl.2007.02.043

Abstact

The following account describes our systematic effort to replace one of the carboxylate groups of our diacid thiophene PTP1B inhibitors. Active hits were validated using enzymatic assays before pursuing efforts to improve the potency. Only when the C2 carboxylic acid was replaced with another ionizable functional group was reversible and competitive inhibition retained. Use of a tetrazole ring or 1,2,5-thiadiazolidine-3-one-1,1-dioxide as a carboxylate mimetic led to the discovery of two unique starting series that showed improved permeability (PAMPA) and potency of the order of 300nM. The SAR from these efforts underscores some of the major challenges in developing small molecule inhibitors for PTP1B.

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Primary Citation of related structures