2NSN image
Deposition Date 2006-11-05
Release Date 2006-12-19
Last Version Date 2023-08-30
Entry Detail
PDB ID:
2NSN
Keywords:
Title:
Crystal structure of Caspace Activation and Recruitment Domain (CARD) of NOD1
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Caspase recruitment domain-containing protein 4
Gene (Uniprot):NOD1
Chain IDs:A
Chain Length:95
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Crystal structure of the Nod1 caspase activation and recruitment domain.
Biochem.Biophys.Res.Commun. 353 1 5 (2007)
PMID: 17173864 DOI: 10.1016/j.bbrc.2006.11.122

Abstact

Nod-like receptors (NLRs), Nod1 and Nod2 are cytosolic detectors of pathogen-associated molecular patterns (PAMPs). Nod1 is a three-domain protein, consisting of a caspase activation and recruitment domain (CARD), a nucleotide-binding oligomerization domain (NOD), and a leucine-rich repeat domain (LRR). The binding of PAMPs to the LRR results in the activation of signaling through homophilic CARD-CARD interactions. Several CARD structures have been determined, including a recent NMR structure of Nod1 CARD. In contrast to the reported NMR structure, the crystal structure reported here is a dimer, where the sixth helix is swapped between two monomers. While the overall structure is very similar to the known CARD structures, this is the first report of a homodimeric CARD structure. The ability of the CARD to exist in monomeric and dimeric forms suggests another level of regulation in the activation of NLR proteins.

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