2NMV image
Deposition Date 2006-10-23
Release Date 2007-01-16
Last Version Date 2023-10-25
Entry Detail
PDB ID:
2NMV
Keywords:
Title:
Damage detection by the UvrABC pathway: Crystal structure of UvrB bound to fluorescein-adducted DNA
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.95 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:UvrABC system protein B
Gene (Uniprot):uvrB
Chain IDs:B (auth: A)
Chain Length:661
Number of Molecules:1
Biological Source:Bacillus subtilis
Polymer Type:polypeptide(L)
Molecule:UvrABC system protein B
Gene (Uniprot):uvrB
Chain IDs:C (auth: B)
Chain Length:38
Number of Molecules:1
Biological Source:Bacillus subtilis
Primary Citation
Damage detection by the UvrABC pathway: crystal structure of UvrB bound to fluorescein-adducted DNA
Febs Lett. 580 6423 6427 (2006)
PMID: 17097086 DOI: 10.1016/j.febslet.2006.10.051

Abstact

UvrB is the damage recognition element of the highly conserved UvrABC pathway that functions in the removal of bulky DNA adducts. Pivotal to this is the formation of a damage detection complex that relies on the ability of UvrB to locate and sequester diverse lesions. Whilst structures of UvrB bound to DNA have recently been reported, none address the issue of lesion recognition. Here, we describe the crystal structure of UvrB bound to a pentanucleotide containing a single fluorescein-adducted thymine that reveals a unique mechanism for damage detection entirely dependent on the exclusion of lesions larger than an undamaged nucleotide.

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Primary Citation of related structures