2NA9 image
Deposition Date 2015-12-21
Release Date 2016-07-06
Last Version Date 2024-05-15
Entry Detail
PDB ID:
2NA9
Title:
Transmembrane Structure of the P441A Mutant of the Cytokine Receptor Common Subunit beta
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
21
Conformers Submitted:
21
Selection Criteria:
all calculated structures submitted
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cytokine receptor common subunit beta
Gene (Uniprot):CSF2RB
Chain IDs:A
Chain Length:44
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
A Conserved Ectodomain-Transmembrane Domain Linker Motif Tunes the Allosteric Regulation of Cell Surface Receptors.
J.Biol.Chem. 291 17536 17546 (2016)
PMID: 27365391 DOI: 10.1074/jbc.M116.733683

Abstact

In many families of cell surface receptors, a single transmembrane (TM) α-helix separates ecto- and cytosolic domains. A defined coupling of ecto- and TM domains must be essential to allosteric receptor regulation but remains little understood. Here, we characterize the linker structure, dynamics, and resulting ecto-TM domain coupling of integrin αIIb in model constructs and relate it to other integrin α subunits by mutagenesis. Cellular integrin activation assays subsequently validate the findings in intact receptors. Our results indicate a flexible yet carefully tuned ecto-TM coupling that modulates the signaling threshold of integrin receptors. Interestingly, a proline at the N-terminal TM helix border, termed NBP, is critical to linker flexibility in integrins. NBP is further predicted in 21% of human single-pass TM proteins and validated in cytokine receptors by the TM domain structure of the cytokine receptor common subunit β and its P441A-substituted variant. Thus, NBP is a conserved uncoupling motif of the ecto-TM domain transition and the degree of ecto-TM domain coupling represents an important parameter in the allosteric regulation of diverse cell surface receptors.

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