2N9D image
Deposition Date 2015-11-15
Release Date 2016-09-21
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2N9D
Title:
Structure analysis of the Tom1 GAT domain reveals distinct ligand-specific conformational states
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
3000
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Target of Myb protein 1
Gene (Uniprot):TOM1
Chain IDs:A
Chain Length:100
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure of the GAT domain of the endosomal adapter protein Tom1.
Data Brief 7 344 348 (2016)
PMID: 26977434 DOI: 10.1016/j.dib.2016.02.042

Abstact

Cellular homeostasis requires correct delivery of cell-surface receptor proteins (cargo) to their target subcellular compartments. The adapter proteins Tom1 and Tollip are involved in sorting of ubiquitinated cargo in endosomal compartments. Recruitment of Tom1 to the endosomal compartments is mediated by its GAT domain's association to Tollip's Tom1-binding domain (TBD). In this data article, we report the solution NMR-derived structure of the Tom1 GAT domain. The estimated protein structure exhibits a bundle of three helical elements. We compare the Tom1 GAT structure with those structures corresponding to the Tollip TBD- and ubiquitin-bound states.

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Primary Citation of related structures