ISDA

Deposition Date 2015-10-21

Release Date 2017-01-25

Last Version Date 2024-05-15

Entry Detail

PDB ID:

2N8M

Keywords:

RNA Binding Protein/RNA

Title:

Zipcode-binding-protein-1 KH3(DD)KH4 domains in complex with the KH4 RNA target

Biological Source:

Source Organism:

Gallus gallus (Taxon ID: 9031)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

SOLUTION NMR

Conformers Calculated:

100

Conformers Submitted:

Selection Criteria:

structures with the lowest energy

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Insulin-like growth factor 2 mRNA-binding protein 1
Gene (Uniprot):IGF2BP1
Mutations:Y14F, K40D, K41D
Chain IDs:A
Chain Length:191
Number of Molecules:1
Biological Source:Gallus gallus

UniProt ID:O42254 Pfam ID:PF00013

Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(P*UP*CP*GP*GP*AP*CP*U)-3')
Chain IDs:B
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

Primary Citation

Zipcode-binding-protein-1 KH3(DD)KH4 domains in complex with the RNA target UCGGACU

Nicastro, G, Ramos, A, Candel, A, Hollingworth, D, Hollingworth, D, Candel, A.M, Nicastro, G, Martin, S.R, Briata, P, Gherzi, R, Ramos, A, Chao, J.A, Patskovsky, Y, Patel, V, Levy, M, Almo, S.C, Singer, R.H, Patel, V.L, Mitra, S, Harris, R, Buxbaum, A.R, Lionnet, T, Brenowitz, M, Girvin, M, Levy, M, Almo, S.C, Singer, R.H, Chao, J.A.Show

To be Published ? ? ? (?)

Primary Citation of related structures