ISDA: 2N47

Deposition Date 2015-06-17

Release Date 2015-07-01

Last Version Date 2024-05-15

Entry Detail

PDB ID:

2N47

Keywords:

STRUCTURAL GENOMICS, UNKNOWN FUNCTION

Title:

EC-NMR Structure of Synechocystis sp. PCC 6803 Slr1183 Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target SgR145

Biological Source:

Source Organism:

Synechocystis sp. PCC 6803 substr. Kazusa (Taxon ID: 1111708)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

SOLUTION NMR

Conformers Calculated:

100

Conformers Submitted:

Selection Criteria:

lowest energy

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Slr1183 protein
Gene (Uniprot):slr1183
Chain IDs:A
Chain Length:202
Number of Molecules:1
Biological Source:Synechocystis sp. PCC 6803 substr. Kazusa

UniProt ID:P74712 Pfam ID:PF13649

Ligand Molecules

Primary Citation

Protein structure determination by combining sparse NMR data with evolutionary couplings.

Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D.S, Montelione, G.T, Lange, O.F, Rossi, P, Sgourakis, N.G, Song, Y, Lee, H.W, Aramini, J.M, Ertekin, A, Xiao, R, Acton, T.B, Montelione, G.T, Baker, D.Show

Nat.Methods 12 751 754 (2015)

PMID: 26121406 DOI: 10.1038/nmeth.3455

Abstact

Accurate determination of protein structure by NMR spectroscopy is challenging for larger proteins, for which experimental data are often incomplete and ambiguous. Evolutionary sequence information together with advances in maximum entropy statistical methods provide a rich complementary source of structural constraints. We have developed a hybrid approach (evolutionary coupling-NMR spectroscopy; EC-NMR) combining sparse NMR data with evolutionary residue-residue couplings and demonstrate accurate structure determination for several proteins 6-41 kDa in size.

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Primary Citation of related structures