2N1T image
Entry Detail
PDB ID:
2N1T
Keywords:
Title:
Dynamic binding mode of a synaptotagmin-1-SNARE complex in solution
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2015-04-21
Release Date:
2015-06-03
Method Details:
Experimental Method:
Conformers Calculated:
10000
Conformers Submitted:
5
Selection Criteria:
Contribution to fit PCS data
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Vesicle-associated membrane protein 2
Chain IDs:A
Chain Length:69
Number of Molecules:1
Biological Source:Rattus norvegicus
Polymer Type:polypeptide(L)
Description:Syntaxin-1A
Chain IDs:B
Chain Length:72
Number of Molecules:1
Biological Source:Rattus norvegicus
Polymer Type:polypeptide(L)
Description:Synaptosomal-associated protein 25
Chain IDs:C
Chain Length:77
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Synaptosomal-associated protein 25
Chain IDs:D
Chain Length:74
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Synaptotagmin-1
Chain IDs:E
Chain Length:156
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Dynamic binding mode of a Synaptotagmin-1-SNARE complex in solution.
Nat.Struct.Mol.Biol. 22 555 564 (2015)
PMID: 26030874 DOI: 10.1038/nsmb.3035

Abstact

Rapid neurotransmitter release depends on the Ca2+ sensor Synaptotagmin-1 (Syt1) and the SNARE complex formed by synaptobrevin, syntaxin-1 and SNAP-25. How Syt1 triggers release has been unclear, partly because elucidating high-resolution structures of Syt1-SNARE complexes has been challenging. An NMR approach based on lanthanide-induced pseudocontact shifts now reveals a dynamic binding mode in which basic residues in the concave side of the Syt1 C2B-domain β-sandwich interact with a polyacidic region of the SNARE complex formed by syntaxin-1 and SNAP-25. The physiological relevance of this dynamic structural model is supported by mutations in basic residues of Syt1 that markedly impair SNARE-complex binding in vitro and Syt1 function in neurons. Mutations with milder effects on binding have correspondingly milder effects on Syt1 function. Our results support a model whereby dynamic interaction facilitates cooperation between Syt1 and the SNAREs in inducing membrane fusion.

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Primary Citation of related structures