2N1R image
Deposition Date 2015-04-15
Release Date 2015-05-27
Last Version Date 2023-06-14
Entry Detail
PDB ID:
2N1R
Keywords:
Title:
NMR Structure of the Myristylated Feline Immunodeficiency Virus Matrix Protein
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
20 structures for lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Matrix protein p15
Gene (Uniprot):gag
Mutagens:Q5A, G6S
Chain IDs:A
Chain Length:135
Number of Molecules:1
Biological Source:Feline immunodeficiency virus (isolate Petaluma)
Ligand Molecules
Primary Citation
NMR structure of the myristylated feline immunodeficiency virus matrix protein.
Viruses 7 2210 2229 (2015)
PMID: 25941825 DOI: 10.3390/v7052210

Abstact

Membrane targeting by the Gag proteins of the human immunodeficiency viruses (HIV types-1 and -2) is mediated by Gag's N-terminally myristylated matrix (MA) domain and is dependent on cellular phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2]. To determine if other lentiviruses employ a similar membrane targeting mechanism, we initiated studies of the feline immunodeficiency virus (FIV), a widespread feline pathogen with potential utility for development of human therapeutics. Bacterial co-translational myristylation was facilitated by mutation of two amino acids near the amino-terminus of the protein (Q5A/G6S; myrMAQ5A/G6S). These substitutions did not affect virus assembly or release from transfected cells. NMR studies revealed that the myristyl group is buried within a hydrophobic pocket in a manner that is structurally similar to that observed for the myristylated HIV-1 protein. Comparisons with a recent crystal structure of the unmyristylated FIV protein [myr(-)MA] indicate that only small changes in helix orientation are required to accommodate the sequestered myr group. Depletion of PI(4,5)P2 from the plasma membrane of FIV-infected CRFK cells inhibited production of FIV particles, indicating that, like HIV, FIV hijacks the PI(4,5)P2 cellular signaling system to direct intracellular Gag trafficking during virus assembly.

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Primary Citation of related structures
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