2N0V image
Deposition Date 2015-03-17
Release Date 2015-12-23
Last Version Date 2024-11-20
Entry Detail
PDB ID:
2N0V
Title:
Backbone 1H, Chemical Shift Assignments for Cn-APM1
Biological Source:
Source Organism:
Cocos nucifera (Taxon ID: 13894)
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Antimicrobial peptide 1
Chain IDs:A
Chain Length:10
Number of Molecules:1
Biological Source:Cocos nucifera
Ligand Molecules
Primary Citation
Structural insights into Cn-AMP1, a short disulfide-free multifunctional peptide from green coconut water.
Febs Lett. 589 639 644 (2015)
PMID: 25639464 DOI: 10.1016/j.febslet.2015.01.029

Abstact

Multifunctional and promiscuous antimicrobial peptides (AMPs) can be used as an efficient strategy to control pathogens. However, little is known about the structural properties of plant promiscuous AMPs without disulfide bonds. CD and NMR were used to elucidate the structure of the promiscuous peptide Cn-AMP1, a disulfide-free peptide isolated from green coconut water. Data here reported shows that peptide structure is transitory and could be different according to the micro-environment. In this regard, Cn-AMP1 showed a random coil in a water environment and an α-helical structure in the presence of SDS-d25 micelles. Moreover, deuterium exchange experiments showed that Gly4, Arg5 and Met9 residues are less accessible to solvent, suggesting that flexibility and cationic charges seem to be essential for Cn-AMP1 multiple activities.

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Primary Citation of related structures