2MU9 image
Deposition Date 2014-09-04
Release Date 2015-09-16
Last Version Date 2024-05-15
Entry Detail
PDB ID:
2MU9
Title:
Changing ABRA protein peptide to fit the HLA-DR B1*0301 molecule renders it protection-inducing
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
50
Conformers Submitted:
21
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:P101/acidic basic repeat antigen
Chain IDs:A
Chain Length:20
Number of Molecules:1
Biological Source:Plasmodium falciparum
Ligand Molecules
Primary Citation
Changing ABRA protein peptide to fit into the HLA-DRbeta1*0301 molecule renders it protection-inducing.
Biochem.Biophys.Res.Commun. 322 119 125 (2004)
PMID: 15313182 DOI: 10.1016/j.bbrc.2004.07.086

Abstact

The Plasmodium falciparum acidic-basic repeat antigen represents a potential malarial vaccine candidate. One of this protein's high activity binding peptides, named 2150 ((161)KMNMLKENVDYIQKNQNLFK(180)), is conserved, non-immunogenic, and non-protection-inducing. Analogue peptides whose critical binding residues (in bold) were replaced by amino-acids having similar mass but different charge were synthesized and tested to try to modify such immunological properties. These analogues' HLA-DRbeta1* molecule binding ability were also studied in an attempt to explain their biological mechanisms and correlate binding capacity and immunological function with their three-dimensional structure determined by (1)H NMR. A 3(10) distorted helical structure was identified in protective and immunogenic peptide 24922 whilst alpha-helical structure was found for non-immunogenic, non-protective peptides having differences in alpha-helical position. The changes performed on immunogenic, protection-inducing peptide 24922 allowed it to bind specifically to the HLA-DRbeta1*0301 molecule, suggesting that these changes may lead to better interaction with the MHC Class II-peptide-TCR complex rendering it immunogenic and protective, thus suggesting a new way of developing multi-component, sub-unit-based anti-malarial vaccines.

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Primary Citation of related structures