2MPB image
Deposition Date 2014-05-14
Release Date 2014-08-20
Last Version Date 2024-05-15
Entry Detail
PDB ID:
2MPB
Title:
NMR structure of BA42 protein from the psychrophilic bacteria Bizionia argentinensis sp. nov
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
1000
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:BA42
Gene (Uniprot):BZARG_1551
Chain IDs:A
Chain Length:145
Number of Molecules:1
Biological Source:Bizionia argentinensis
Ligand Molecules
Primary Citation
Solution and crystal structure of BA42, a protein from the Antarctic bacterium Bizionia argentinensis comprised of a stand-alone TPM domain.
Proteins 82 3062 3078 (2014)
PMID: 25116514 DOI: 10.1002/prot.24667

Abstact

The structure of the BA42 protein belonging to the Antarctic flavobacterium Bizionia argentinensis was determined by nuclear magnetic resonance and X-ray crystallography. This is the first structure of a member of the PF04536 family comprised of a stand-alone TPM domain. The structure reveals a new topological variant of the four β-strands constituting the central β-sheet of the αβα architecture and a double metal binding site stabilizing a pair of crossing loops, not observed in previous structures of proteins belonging to this family. BA42 shows differences in structure and dynamics in the presence or absence of bound metals. The affinity for divalent metal ions is close to that observed in proteins that modulate their activity as a function of metal concentration, anticipating a possible role for BA42.

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Primary Citation of related structures