2MLS image
Deposition Date 2014-03-04
Release Date 2014-12-03
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2MLS
Keywords:
Title:
Membrane Bilayer complex with Matrix Metalloproteinase-12 at its Beta-face
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
14
Conformers Submitted:
14
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Macrophage metalloelastase
Gene (Uniprot):MMP12
Chain IDs:A
Chain Length:164
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Ambidextrous binding of cell and membrane bilayers by soluble matrix metalloproteinase-12.
Nat Commun 5 5552 5552 (2014)
PMID: 25412686 DOI: 10.1038/ncomms6552

Abstact

Matrix metalloproteinases (MMPs) regulate tissue remodelling, inflammation and disease progression. Some soluble MMPs are inexplicably active near cell surfaces. Here we demonstrate the binding of MMP-12 directly to bilayers and cellular membranes using paramagnetic NMR and fluorescence. Opposing sides of the catalytic domain engage spin-labelled membrane mimics. Loops project from the β-sheet interface to contact the phospholipid bilayer with basic and hydrophobic residues. The distal membrane interface comprises loops on the other side of the catalytic cleft. Both interfaces mediate MMP-12 association with vesicles and cell membranes. MMP-12 binds plasma membranes and is internalized to hydrophobic perinuclear features, the nuclear membrane and inside the nucleus within minutes. While binding of TIMP-2 to MMP-12 hinders membrane interactions beside the active site, TIMP-2-inhibited MMP-12 binds vesicles and cells, suggesting compensatory rotation of its membrane approaches. MMP-12 association with diverse cell membranes may target its activities to modulate innate immune responses and inflammation.

Legend

Protein

Chemical

Disease

Primary Citation of related structures