2MIJ image
Deposition Date 2013-12-13
Release Date 2014-03-12
Last Version Date 2024-11-20
Entry Detail
PDB ID:
2MIJ
Title:
NMR structure of the S-linked glycopeptide sublancin 168
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
150
Conformers Submitted:
15
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SPBc2 prophage-derived bacteriocin sublancin-168
Gene (Uniprot):sunA
Chain IDs:A
Chain Length:37
Number of Molecules:1
Biological Source:Bacillus subtilis
Ligand Molecules
Primary Citation
NMR structure of the s-linked glycopeptide sublancin 168.
Acs Chem.Biol. 9 796 801 (2014)
PMID: 24405370 DOI: 10.1021/cb4008106

Abstact

Sublancin 168 is a member of a small group of glycosylated antimicrobial peptides known as glycocins. The solution structure of sublancin 168, a 37-amino-acid peptide produced by Bacillus subtilis 168, has been solved by nuclear magnetic resonance (NMR) spectroscopy. Sublancin comprises two α-helices and a well-defined interhelical loop. The two helices span residues 6-16 and 26-35, and the loop region encompasses residues 17-25. The 9-amino-acid loop region contains a β-S-linked glucose moiety attached to Cys22. Hydrophobic interactions as well as hydrogen bonding are responsible for the well-structured loop region. The three-dimensional structure provides an explanation for the previously reported extraordinary high stability of sublancin 168.

Legend

Protein

Chemical

Disease

Primary Citation of related structures