2MEX image
Deposition Date 2013-10-01
Release Date 2013-12-25
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2MEX
Title:
Structure of the tetrameric building block of the Salmonella Typhimurium PrgI Type three secretion system needle
Biological Source:
Expression System(s):
Method Details:
Experimental Method:
Conformers Calculated:
640
Conformers Submitted:
15
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein PrgI
Gene (Uniprot):sctF1
Chain IDs:A, B, C, D
Chain Length:80
Number of Molecules:4
Biological Source:Salmonella enterica subsp. enterica serovar Typhimurium
Ligand Molecules
Primary Citation
Atomic structure and handedness of the building block of a biological assembly.
J.Am.Chem.Soc. 135 19135 19138 (2013)
PMID: 24328247 DOI: 10.1021/ja411362q

Abstact

Noncovalent supramolecular assemblies possess in general several unique subunit-subunit interfaces.The basic building block of such an assembly consists of several subunits and contains all unique interfaces. Atomic-resolution structures of monomeric subunits are typically accessed by crystallography or solution NMR and fitted into electron microscopy density maps. However, the structure of the intact building block in the assembled state remains unknown with this hybrid approach. Here, we present the solid-state NMR atomic structure of the building block of the type III secretion system needle. The building block structure consists of a homotetrameric subunit complex with three unique supramolecular interfaces. Side-chain positions at the interfaces were solved at atomic detail. The high-resolution structure reveals unambiguously the helical handedness of the assembly, determined to be right-handed for the type III secretion system needle.Additionally, the axial rise per subunit could be extracted from the tetramer structure and independently validated by mass-per-length measurements.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback