2MAL image
Deposition Date 2013-07-16
Release Date 2013-10-02
Last Version Date 2024-11-20
Entry Detail
PDB ID:
2MAL
Keywords:
Title:
Solution structure of Lipid Transfer Protein from Lentil Lens Culinaris
Biological Source:
Source Organism:
Lens culinaris (Taxon ID: 3864)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
target function
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Non-specific lipid-transfer protein 2
Chain IDs:A
Chain Length:93
Number of Molecules:1
Biological Source:Lens culinaris
Ligand Molecules
Primary Citation
Recombinant production and solution structure of lipid transfer protein from lentil Lens culinaris.
Biochem.Biophys.Res.Commun. 439 427 432 (2013)
PMID: 23998937 DOI: 10.1016/j.bbrc.2013.08.078

Abstact

Lipid transfer protein, designated as Lc-LTP2, was isolated from seeds of the lentil Lens culinaris. The protein has molecular mass 9282.7Da, consists of 93 amino acid residues including 8 cysteines forming 4 disulfide bonds. Lc-LTP2 and its stable isotope labeled analogues were overexpressed in Escherichia coli and purified. Antimicrobial activity of the recombinant protein was examined, and its spatial structure was studied by NMR spectroscopy. The polypeptide chain of Lc-LTP2 forms four α-helices (Cys4-Leu18, Pro26-Ala37, Thr42-Ala56, Thr64-Lys73) and a long C-terminal tail without regular secondary structure. Side chains of the hydrophobic residues form a relatively large internal tunnel-like lipid-binding cavity (van der Waals volume comes up to ∼600Å(3)). The side-chains of Arg45, Pro79, and Tyr80 are located near an assumed mouth of the cavity. Titration with dimyristoyl phosphatidylglycerol (DMPG) revealed formation of the Lc-LTP2/lipid non-covalent complex accompanied by rearrangements in the protein spatial structure and expansion of the internal cavity. The resultant Lc-LTP2/DMPG complex demonstrates limited lifetime and dissociates within tens of hours.

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Primary Citation of related structures
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