2M9S image
Deposition Date 2013-06-19
Release Date 2013-09-11
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2M9S
Keywords:
Title:
3D NMR structure of a complex between the amyloid beta peptide (1-40) and the polyphenol epsilon-viniferin glucoside
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
9
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Amyloid beta A4 protein
Gene (Uniprot):APP
Chain IDs:A
Chain Length:40
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
3D NMR structure of a complex between the amyloid beta peptide (1-40) and the polyphenol epsilon-viniferin glucoside: Implications in Alzheimer's disease.
Biochim.Biophys.Acta 1830 5068 5074 (2013)
PMID: 23830862 DOI: 10.1016/j.bbagen.2013.06.031

Abstact

BACKGROUND Alzheimer's disease (AD) is a progressive neurodegenerative disorder. There is a consensus that Aβ is a pathologic agent and that its toxic effects, which are at present incompletely understood, may occur through several potential mechanisms. Polyphenols are known to have wide-ranging properties with regard to health and for helping to prevent various diseases like neurodegenerative disorders. Thus inhibiting the formation of toxic Aβ assemblies is a reasonable hypothesis to prevent and perhaps treat AD METHODS: Solution NMR and molecular modeling were used to obtain more information about the interaction between the Aβ1-40 and the polyphenol ε-viniferin glucoside (EVG) and particularly the Aβ residues involved in the complex. RESULTS The study demonstrates the formation of a complex between two EVG molecules and Aβ1-40 in peptide characteristic regions that could be in agreement with the inhibition of aggregation. Indeed, in previous studies, we reported that EVG strongly inhibited in vitro the fibril formation of the full length peptides Aβ1-40 and Aβ1-42, and had a strong protective effect against PC12 cell death induced by these peptides. CONCLUSION For the full length peptide Aβ1-40, the binding sites observed could explain the EVG inhibitory effect on fibrillization and thus prevent amyloidogenic neurotoxicity. GENERAL SIGNIFICANCE Even though this interaction might be important at the biological level to explain the protective effect of polyphenols in neurodegenerative diseases, caution is required when extrapolating this in vitro model to human physiology.

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