2M1K image
Entry Detail
PDB ID:
2M1K
Keywords:
Title:
Interaction of Human S100A6 (C3S) with V domain of Receptor for Advanced Glycation End products (RAGE)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2012-11-29
Release Date:
2015-03-25
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Advanced glycosylation end product-specific receptor
Chain IDs:C (auth: A), D (auth: C)
Chain Length:101
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Protein S100-A6
Mutations:C3S
Chain IDs:A (auth: B), B (auth: D)
Chain Length:90
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Interaction of the S100A6 mutant (C3S) with the V domain of the receptor for advanced glycation end products (RAGE).
Biochem.Biophys.Res.Commun. 434 328 333 (2013)
PMID: 23537648 DOI: 10.1016/j.bbrc.2013.03.049

Abstact

S100A6 is involved in several vital biological functions, such as calcium sensing and cell proliferation. It is a homodimeric protein that belongs to the S100 protein family. The receptor for advanced glycation end products (RAGE) has been shown to play a role in the progression of various disease conditions, such as diabetes and immune/inflammatory disorders. Information regarding the association of RAGE with S100 proteins at a molecular level is useful to understand the diversity of the RAGE signaling pathways. In this report, biomolecular NMR techniques were utilized for the resonance assignment of the C3S mutation in human S100A6 and characterizing its interaction with the RAGE V domain. Further binding affinity between S100A6m and the RAGE V domain was determined by isothermal titration calorimetric studies. HADDOCK was used to generate a heterotetramer model of the S100A6m-RAGE V domain complex. This model provides an important insights into the S100-RAGE cellular signaling pathway.

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Primary Citation of related structures