2LZE image
Deposition Date 2012-10-01
Release Date 2012-10-24
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2LZE
Keywords:
Title:
Ligase 10C
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:a primordial catalytic fold generated by in vitro evolution
Chain IDs:A
Chain Length:87
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Structure and dynamics of a primordial catalytic fold generated by in vitro evolution.
Nat.Chem.Biol. 9 81 83 (2013)
PMID: 23222886 DOI: 10.1038/nchembio.1138

Abstact

Engineering functional protein scaffolds capable of carrying out chemical catalysis is a major challenge in enzyme design. Starting from a noncatalytic protein scaffold, we recently generated a new RNA ligase by in vitro directed evolution. This artificial enzyme lost its original fold and adopted an entirely new structure with substantially enhanced conformational dynamics, demonstrating that a primordial fold with suitable flexibility is sufficient to carry out enzymatic function.

Legend

Protein

Chemical

Disease

Primary Citation of related structures