2LYP image
Deposition Date 2012-09-19
Release Date 2013-02-20
Last Version Date 2024-05-15
Entry Detail
PDB ID:
2LYP
Title:
NOE-based 3D structure of the monomer of CylR2 in equilibrium with predissociated homodimer at 266K (-7 Celsius degrees)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CylR2
Gene (Uniprot):cylR2
Chain IDs:A
Chain Length:66
Number of Molecules:1
Biological Source:Enterococcus faecalis
Ligand Molecules
Primary Citation
Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol. 9 264 270 (2013)
PMID: 23396077 DOI: 10.1038/nchembio.1181

Abstact

Protein folding and unfolding are crucial for a range of biological phenomena and human diseases. Defining the structural properties of the involved transient species is therefore of prime interest. Using a combination of cold denaturation with NMR spectroscopy, we reveal detailed insight into the unfolding of the homodimeric repressor protein CylR2. Seven three-dimensional structures of CylR2 at temperatures from 25 °C to -16 °C reveal a progressive dissociation of the dimeric protein into a native-like monomeric intermediate followed by transition into a highly dynamic, partially folded state. The core of the partially folded state seems critical for biological function and misfolding.

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Primary Citation of related structures
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