2LXD image
Deposition Date 2012-08-20
Release Date 2012-09-12
Last Version Date 2024-05-15
Entry Detail
PDB ID:
2LXD
Keywords:
Title:
Backbone 1H, 13C, and 15N Chemical Shift Assignments for LMO2(LIM2)-Ldb1(LID)
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
20
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Rhombotin-2,LIM domain-binding protein 1
Gene (Uniprot):Lmo2, Ldb1
Mutations:C47S
Chain IDs:A
Chain Length:125
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Solution structure of a tethered Lmo2(LIM2) /Ldb1(LID) complex.
Protein Sci. 21 1768 1774 (2012)
PMID: 22936624 DOI: 10.1002/pro.2153

Abstact

LIM-only protein 2, Lmo2, is a regulatory protein that is essential for hematopoietic development and inappropriate overexpression of Lmo2 in T-cells contributes to T-cell leukemia. It exerts its functions by mediating protein-protein interactions and nucleating multicomponent transcriptional complexes. Lmo2 interacts with LIM domain binding protein 1 (Ldb1) through the tandem LIM domains of Lmo2 and the LIM interaction domain (LID) of Ldb1. Here, we present the solution structure of the LIM2 domain of Lmo2 bound to Ldb1(LID) . The ordered regions of Ldb1 in this complex correspond well with binding hotspots previously defined by mutagenic studies. Comparisons of this Lmo2(LIM2) -Ldb1(LID) structure with previously determined structures of the Lmo2/Ldb1(LID) complexes lead to the conclusion that modular binding of tandem LIM domains in Lmo2 to tandem linear motifs in Ldb1 is accompanied by several disorder-to-order transitions and/or conformational changes in both proteins.

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Primary Citation of related structures