2LTJ image
Entry Detail
PDB ID:
2LTJ
Keywords:
Title:
Conformational analysis of StrH, the surface-attached exo- beta-D-N-acetylglucosaminidase from Streptococcus pneumoniae
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2012-05-28
Release Date:
2012-11-28
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
21
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Beta-N-acetylhexosaminidase
Chain IDs:A
Chain Length:112
Number of Molecules:1
Biological Source:Streptococcus pneumoniae
Ligand Molecules
Primary Citation
Conformational analysis of StrH, the surface-attached exo-beta-D-N-acetylglucosaminidase from Streptococcus pneumoniae.
J.Mol.Biol. 425 334 349 (2013)
PMID: 23154168 DOI: 10.1016/j.jmb.2012.11.005

Abstact

Streptococcus pneumoniae is a serious human pathogen that presents on its surface numerous proteins involved in the host-bacterium interaction. The carbohydrate-active enzymes are particularly well represented among these surface proteins, and many of these are known virulence factors, highlighting the importance of carbohydrate processing by this pathogen. StrH is a surface-attached exo-β-D-N-acetylglucosaminidase that cooperates with the sialidase NanA and the β-galactosidase BgaA to sequentially degrade the nonreducing terminal arms of complex N-linked glycans. This enzyme is a large multi-modular protein that is notable for its tandem N-terminal family GH20 catalytic modules, whose individual X-ray crystal structures were recently reported. StrH also contains C-terminal tandem G5 modules, which are uncharacterized. Here, we report the NMR-determined solution structure of the first G5 module in the tandem, G5-1, which along with the X-ray crystal structures of the GH20 modules was used in conjunction with small-angle X-ray scattering to construct a pseudo-atomic model of full-length StrH. The results reveal a model in which StrH adopts an elongated conformation that may project the catalytic modules away from the surface of the bacterium to a distance of up to ~250 Å.

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Primary Citation of related structures