2LP6 image
Deposition Date 2012-02-02
Release Date 2012-02-15
Last Version Date 2024-05-15
Entry Detail
PDB ID:
2LP6
Title:
Refined Solution NMR Structure of the 50S ribosomal protein L35Ae from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target (NESG) PfR48
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:50S ribosomal protein L35Ae
Gene (Uniprot):rpl35ae
Chain IDs:A
Chain Length:95
Number of Molecules:1
Biological Source:Pyrococcus furiosus
Ligand Molecules
Primary Citation
Solution NMR structure of the ribosomal protein RP-L35Ae from Pyrococcus furiosus.
Proteins 80 1901 1906 (2012)
PMID: 22422653 DOI: 10.1002/prot.24071

Abstact

The ribosome consists of small and large subunits each composed of dozens of proteins and RNA molecules. However, the functions of many of the individual protomers within the ribosome are still unknown. In this article, we describe the solution NMR structure of the ribosomal protein RP-L35Ae from the archaeon Pyrococcus furiosus. RP-L35Ae is buried within the large subunit of the ribosome and belongs to Pfam protein domain family PF01247, which is highly conserved in eukaryotes, present in a few archaeal genomes, but absent in bacteria. The protein adopts a six-stranded anti-parallel β-barrel analogous to the "tRNA binding motif" fold. The structure of the P. furiosus RP-L35Ae presented in this article constitutes the first structural representative from this protein domain family.

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