2LM9 image
Deposition Date 2011-11-29
Release Date 2012-08-22
Last Version Date 2024-05-15
Entry Detail
PDB ID:
2LM9
Keywords:
Title:
The NMR structure of a major allergen from dust mite
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Blo t 21 allergen
Chain IDs:A
Chain Length:96
Number of Molecules:1
Biological Source:Blomia tropicalis
Ligand Molecules
Primary Citation
NMR structure and IgE epitopes of Blo t 21, a major dust mite allergen from Blomia tropicalis
J.Biol.Chem. ? ? ? (2012)
PMID: 22887997 DOI: 10.1074/jbc.M112.348730

Abstact

Blo t 21 is a paralogue of the group 5 allergen, Blo t 5, a major allergen from the dust mite Blomia tropicalis. Blo t 21 has moderate sequence identity (40.7%) to Blo t 5 and low to moderate cross-reactivity to Blo t 5. In B. tropicalis, the most prevalent and allergenic allergens are in the order of Blo t 21, Blo t 5, and Blo t 7. Here, we determined the NMR solution structure of Blo t 21, which represents the first structure of the group 21 dust mite allergen. The structure of Blo t 21 closely resembles the structures of Blo t 5 and Der p 5, comprising three anti-parallel α-helices arranged in a helical bundle. Using site-directed mutagenesis and specific IgE binding ELISA, Blo t 21 was found to contain both conserved and unique charged IgE epitope residues at the L2 loop region and on helix α3. Cross-inhibition assays confirmed that Blo t 21 has a low to moderate cross-reactivity with Blo t 5 and Der p 5 and represents a novel group of major allergen in B. tropicalis. In addition to group 5 allergens, Blo t 21 has also a low to moderate cross-reactivity with group 21 allergens from Dermatophagoides mites, confirming that B. tropicalis is a major and distinct source of dust mite allergens.

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Primary Citation of related structures