2LID image
Deposition Date 2011-08-29
Release Date 2012-07-11
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2LID
Keywords:
Title:
The polyserine tract of Nasonia vitripennis Vg residues 351-385
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Vitellogenin
Chain IDs:A
Chain Length:35
Number of Molecules:1
Biological Source:Nasonia vitripennis
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SEP A SER PHOSPHOSERINE
Ligand Molecules
Primary Citation
A vitellogenin polyserine cleavage site: highly disordered conformation protected from proteolysis by phosphorylation.
J Exp Biol 215 1837 1846 (2012)
PMID: 22573762 DOI: 10.1242/jeb.065623

Abstact

Vitellogenin (Vg) is an egg-yolk precursor protein in most oviparous species. In honeybee (Apis mellifera), the protein (AmVg) also affects social behavior and life-span plasticity. Despite its manifold functions, the AmVg molecule remains poorly understood. The subject of our structure-oriented AmVg study is its polyserine tract - a little-investigated repetitive protein segment mostly found in insects. We previously reported that AmVg is tissue specifically cleaved in the vicinity of this tract. Here, we show that, despite its potential for an open, disordered structure, AmVg is unexpectedly resistant to trypsin/chymotrypsin digestion at the tract. Our findings suggest that multiple phosphorylation plays a role in this resilience. Sequence variation is highly pronounced at the polyserine region in insect Vgs. We demonstrate that sequence differences in this region can lead to structural variation, as NMR and circular dichroism (CD) evidence assign different conformational propensities to polyserine peptides from the honeybee and the jewel wasp Nasonia vitripennis; the former is extended and disordered and the latter more compact and helical. CD analysis of the polyserine region of bumblebee Bombus ignitus and wasp Pimpla nipponica supports a random coil structure in these species. The spectroscopic results strengthen our model of the AmVg polyserine tract as a flexible domain linker shielded by phosphorylation.

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Primary Citation of related structures