2LFM image
Deposition Date 2011-07-06
Release Date 2011-07-20
Last Version Date 2024-05-15
Entry Detail
PDB ID:
2LFM
Keywords:
Title:
A partially folded structure of amyloid-beta(1 40) in an aqueous environment
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Beta-amyloid protein 40
Gene (Uniprot):APP
Chain IDs:A
Chain Length:40
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
A partially folded structure of amyloid-beta(1-40) in an aqueous environment.
Biochem.Biophys.Res.Commun. 411 312 316 (2011)
PMID: 21726530 DOI: 10.1016/j.bbrc.2011.06.133

Abstact

Aggregation of the Aβ(1-40) peptide is linked to the development of extracellular plaques characteristic of Alzheimer's disease. While previous studies commonly show the Aβ(1-40) is largely unstructured in solution, we show that Aβ(1-40) can adopt a compact, partially folded structure. In this structure (PDB ID: 2LFM), the central hydrophobic region of the peptide forms a 3(10) helix from H13 to D23 and the N- and C-termini collapse against the helix due to the clustering of hydrophobic residues. Helical intermediates have been predicted to be crucial on-pathway intermediates in amyloid fibrillogenesis, and the structure presented here presents a new target for investigation of early events in Aβ(1-40) fibrillogenesis.

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Primary Citation of related structures