2L9L image
Deposition Date 2011-02-21
Release Date 2012-08-29
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2L9L
Keywords:
Title:
NMR Structure of the Mouse MFG-E8 C2 Domain
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Lactadherin
Gene (Uniprot):Mfge8
Chain IDs:A
Chain Length:170
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
NMR solution structure of C2 domain of MFG-E8 and insights into its molecular recognition with phosphatidylserine
Biochim.Biophys.Acta 1828 1083 1093 (2013)
PMID: 23262193 DOI: 10.1016/j.bbamem.2012.12.009

Abstact

MFG-E8 (also known as lactadherin), which is a secreted glycoprotein from a variety of cell types, possesses two EGF domains and tandem C domains with sequence homology to that of blood coagulation proteins factor V and factor VIII. MFG-E8 binds to phosphatidylserine (PS) in membranes with high affinity. We have recently shown that the C2 domain of MFG-E8 bears more specificity toward PS when compared with phosphatidylcholine (PC), another phospholipid thought to be involved in the immune function of phagocytes. In our current study, we have determined the solution structure of the C2 domain by nuclear magnetic resonance (NMR) spectroscopy, and characterized the molecular basis of binding between the C2 domain and PS by (31)P-NMR spectroscopy. Furthermore, we also verified that that positively charged and aromatic residues clustered in loops 1-3 of the C2 domain play key roles in recognizing PS in apoptotic cells.

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Primary Citation of related structures