2L83 image
Deposition Date 2011-01-03
Release Date 2012-01-11
Last Version Date 2024-05-15
Entry Detail
PDB ID:
2L83
Keywords:
Title:
A protein from Haloferax volcanii
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small archaeal modifier protein 1
Gene (Uniprot):samp1
Chain IDs:A
Chain Length:95
Number of Molecules:1
Biological Source:Haloferax volcanii
Ligand Molecules
Primary Citation
Ionic strength-dependent conformations of a ubiquitin-like small archaeal modifier protein (SAMP1) from Haloferax volcanii.
Protein Sci. 22 1174 1182 (2013)
PMID: 23818097 DOI: 10.1002/pro.2302

Abstact

Eukaryotic ubiquitin and ubiquitin-like systems play crucial roles in various cellular biological processes. In this work, we determined the solution structure of SAMP1 from Haloferax volcanii by NMR spectroscopy. Under low ionic conditions, SAMP1 presented two distinct conformations, one folded β-grasp and the other disordered. Interestingly, SAMP1 underwent a conformational conversion from disorder to order with ion concentration increasing, indicating that the ordered conformation is the functional form of SAMP1 under the physiological condition of H. volcanii. Furthermore, SAMP1 could interact with proteasome-activating nucleotidase B, supposing a potential role of SAMP1 in the protein degradation pathway mediated by proteasome.

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Primary Citation of related structures
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