2L7U image
Deposition Date 2010-12-23
Release Date 2011-05-18
Last Version Date 2023-11-29
Entry Detail
PDB ID:
2L7U
Keywords:
Title:
Structure of CEL-PEP-RAGE V domain complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Bos taurus (Taxon ID: 9913)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
30
Conformers Submitted:
25
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Advanced glycosylation end product-specific receptor
Gene (Uniprot):AGER
Chain IDs:A
Chain Length:105
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Serum albumin peptide
Gene (Uniprot):ALB
Chain IDs:B
Chain Length:7
Number of Molecules:1
Biological Source:Bos taurus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
KPI B LYS NZ-(1-CARBOXYETHYL)-LYSINE
Ligand Molecules
Primary Citation
Advanced glycation end product recognition by the receptor for AGEs.
Structure 19 722 732 (2011)
PMID: 21565706 DOI: 10.1016/j.str.2011.02.013

Abstact

Nonenzymatic protein glycation results in the formation of advanced glycation end products (AGEs) that are implicated in the pathology of diabetes, chronic inflammation, Alzheimer's disease, and cancer. AGEs mediate their effects primarily through a receptor-dependent pathway in which AGEs bind to a specific cell surface associated receptor, the Receptor for AGEs (RAGE). N(ɛ)-carboxy-methyl-lysine (CML) and N(ɛ)-carboxy-ethyl-lysine (CEL), constitute two of the major AGE structures found in tissue and blood plasma, and are physiological ligands of RAGE. The solution structure of a CEL-containing peptide-RAGE V domain complex reveals that the carboxyethyl moiety fits inside a positively charged cavity of the V domain. Peptide backbone atoms make specific contacts with the V domain. The geometry of the bound CEL peptide is compatible with many CML (CEL)-modified sites found in plasma proteins. The structure explains how such patterned ligands as CML (CEL)-proteins bind to RAGE and contribute to RAGE signaling.

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Primary Citation of related structures
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