2L4V image
Deposition Date 2010-10-15
Release Date 2011-10-26
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2L4V
Title:
Three Dimensional Structure of Pineapple Cystatin
Biological Source:
Source Organism:
Ananas comosus (Taxon ID: 4615)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cystatin
Chain IDs:A
Chain Length:135
Number of Molecules:1
Biological Source:Ananas comosus
Ligand Molecules
Primary Citation
Resonance assignments and secondary structure of a phytocystatin from Ananas comosus
Biomol.Nmr Assign. 6 99 101 (2012)
PMID: 21814766 DOI: 10.1007/s12104-011-9334-1

Abstact

A cDNA encoding a cysteine protease inhibitor, cystatin was cloned from pineapple (Ananas comosus L.) stem. This clone was constructed into an expression vector and expressed in E. coli and purified to homogeneous. The recombinant pineapple cystatins (AcCYS) showed effectively inhibitory activity toward cysteine proteases including papain, bromelain, and cathepsin B. In order to unravel its inhibitory action from structural point of view, multidimensional heteronuclear NMR techniques were used to characterize the structure of AcCYS. The full (1)H, (15)N, and (13)C resonance assignments of AcCYS were determined. The secondary structure of AcCYS was identified by using the assigned chemical shift of (1)Hα, (13)Cα, (13)Cβ, and (13)CO through the consensus chemical shift index (CSI). The results of CSI analysis suggest 5 β-strands (residues 45-47, 84-91, 94-104, 106-117, and 123-130) and one α-helix (residues 55-73).

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Primary Citation of related structures