2L3I image
Deposition Date 2010-09-14
Release Date 2011-09-14
Last Version Date 2024-11-27
Entry Detail
PDB ID:
2L3I
Title:
Oxki4a, spider derived antimicrobial peptide
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:AOXKI4A, antimicrobial peptide in spider venom
Chain IDs:A
Chain Length:30
Number of Molecules:1
Biological Source:Oxyopes takobius
Ligand Molecules
Primary Citation
Novel lynx spider toxin shares common molecular architecture with defense peptides from frog skin.
Febs J. 278 4382 4393 (2011)
PMID: 21933345 DOI: 10.1111/j.1742-4658.2011.08361.x

Abstact

A unique 30-residue cationic peptide oxyopinin 4a (Oxt 4a) was identified in the venom of the lynx spider Oxyopes takobius (Oxyopidae). Oxt 4a contains a single N-terminally located disulfide bond, Cys4-Cys10, and is structurally different from any spider toxin studied so far. According to NMR findings, the peptide is disordered in water, but assumes a peculiar torpedo-like structure in detergent micelles. It features a C-terminal amphipathic α-helical segment (body; residues 12-25) and an N-terminal disulfide-stabilized loop (head; residues 1-11), and has an unusually high density of positive charge in the head region. Synthetic Oxt 4a was produced and shown to possess strong and broad-spectrum cytolytic and antimicrobial activity. cDNA cloning showed that the peptide is synthesized in the form of a conventional prepropeptide with an acidic prosequence. Unlike other arachnid toxins, Oxt 4a exhibits striking similarity with defense peptides from the skin of ranid frogs that contain the so-called Rana-box motif (a C-terminal disulfide-enclosed loop). Parallelism or convergence is apparent on several levels: the structure, function and biosynthesis of a lynx spider toxin are mirrored by those of Rana-box peptides from frogs.

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Primary Citation of related structures