2L23 image
Deposition Date 2010-08-10
Release Date 2010-11-24
Last Version Date 2024-05-22
Entry Detail
PDB ID:
2L23
Keywords:
Title:
NMR structure of the ACID (ACtivator Interacting Domain) of the human mediator Med25 protein
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
20
Conformers Submitted:
20
Selection Criteria:
all calculated structures submitted
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Mediator of RNA polymerase II transcription subunit 25
Gene (Uniprot):MED25
Chain IDs:A
Chain Length:167
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
NMR structure of the human Mediator MED25 ACID domain.
J.Struct.Biol. 174 245 251 (2011)
PMID: 20974256 DOI: 10.1016/j.jsb.2010.10.011

Abstact

MED25 (ARC92/ACID1) is a 747 residues subunit specific to higher eukaryote Mediator complex, an essential component of the RNA polymerase II general transcriptional machinery. MED25 is a target of the Herpes simplex virus transactivator protein VP16. MED25 interacts with VP16 through a central MED25 PTOV (Prostate tumour overexpressed)/ACID (Activator interacting domain) domain of unknown structure. As a first step towards understanding the mechanism of recruitment of transactivation domains by MED25, we report here the NMR structure of the MED25 ACID domain. The domain architecture consists of a closed β-barrel with seven strands (Β1-Β7) and three α-helices (H1-H3), an architecture showing similarities to that of the SPOC (Spen paralog and ortholog C-terminal domain) domain-like superfamily. Preliminary NMR chemical shift mapping showed that VP16 H2 (VP16C) interacts with MED25 ACID through one face of the β-barrel, defined by strands B4-B7-B6.

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Primary Citation of related structures