2KXW image
Deposition Date 2010-05-13
Release Date 2011-04-13
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2KXW
Title:
Structure of the C-domain Fragment of apo Calmodulin Bound to the IQ motif of Nav1.2
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
300
Conformers Submitted:
21
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Calmodulin
Gene (Uniprot):CAM
Chain IDs:A
Chain Length:73
Number of Molecules:1
Biological Source:Paramecium tetraurelia
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sodium channel protein type 2 subunit alpha
Gene (Uniprot):Scn2a
Chain IDs:B
Chain Length:27
Number of Molecules:1
Biological Source:Rattus norvegicus
Ligand Molecules
Primary Citation
Structural and Energetic Determinants of Apo Calmodulin Binding to the IQ Motif of the Na(V)1.2 Voltage-Dependent Sodium Channel.
Structure 19 733 747 (2011)
PMID: 21439835 DOI: 10.1016/j.str.2011.02.009

Abstact

The neuronal voltage-dependent sodium channel (Na(v)1.2), essential for generation and propagation of action potentials, is regulated by calmodulin (CaM) binding to the IQ motif in its α subunit. A peptide (Na(v)1.2(IQp), KRKQEEVSAIVIQRAYRRYLLKQKVKK) representing the IQ motif had higher affinity for apo CaM than (Ca(2+))(4)-CaM. Association was mediated solely by the C-domain of CaM. A solution structure (2KXW.pdb) of apo (13)C,(15)N-CaM C-domain bound to Na(v)1.2(IQp) was determined with NMR. The region of Na(v)1.2(IQp) bound to CaM was helical; R1902, an Na(v)1.2 residue implicated in familial autism, did not contact CaM. The apo C-domain of CaM in this complex shares features of the same domain bound to myosin V IQ motifs (2IX7) and bound to an SK channel peptide (1G4Y) that does not contain an IQ motif. Thermodynamic and structural studies of CaM-Na(v)1.2(IQp) interactions show that apo and (Ca(2+))(4)-CaM adopt distinct conformations that both permit tight association with Na(v)1.2(IQp) during gating.

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Primary Citation of related structures
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