2KSY image
Entry Detail
PDB ID:
2KSY
Title:
Solution nmr structure of sensory rhodopsin II
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2010-01-14
Release Date:
2010-06-02
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
30
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Sensory rhodopsin II
Chain IDs:A
Chain Length:247
Number of Molecules:1
Biological Source:Natronomonas pharaonis
Ligand Molecules
Primary Citation
Structure determination of the seven-helix transmembrane receptor sensory rhodopsin II by solution NMR spectroscopy.
Nat.Struct.Mol.Biol. 17 768 774 (2010)
PMID: 20512150 DOI: 10.1038/nsmb.1807

Abstact

Seven-helix membrane proteins represent a challenge for structural biology. Here we report the first NMR structure determination of a detergent-solubilized seven-helix transmembrane (7TM) protein, the phototaxis receptor sensory rhodopsin II (pSRII) from Natronomonas pharaonis, as a proof of principle. The overall quality of the structure ensemble is good (backbone r.m.s. deviation of 0.48 A) and agrees well with previously determined X-ray structures. Furthermore, measurements in more native-like small phospholipid bicelles indicate that the protein structure is the same as in detergent micelles, suggesting that environment-specific effects are minimal when using mild detergents. We use our case study as a platform to discuss the feasibility of similar solution NMR studies for other 7TM proteins, including members of the family of G protein-coupled receptors.

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