2KRJ image
Entry Detail
PDB ID:
2KRJ
Keywords:
Title:
High-Resolution Solid-State NMR Structure of a 17.6 kDa Protein
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2009-12-18
Release Date:
2010-02-23
Method Details:
Experimental Method:
Conformers Calculated:
2000
Conformers Submitted:
20
Selection Criteria:
target function
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Macrophage metalloelastase
Chain IDs:A
Chain Length:152
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
High-resolution solid-state NMR structure of a 17.6 kDa protein.
J.Am.Chem.Soc. 132 1032 1040 (2010)
PMID: 20041641 DOI: 10.1021/ja906426p

Abstact

The use of pseudocontact shifts arising from paramagnetic metal ions in a microcrystalline protein sample is proposed as a strategy to obtain unambiguous signal assignments in solid-state NMR spectra enabling distance extraction for protein structure calculation. With this strategy, 777 unambiguous (281 sequential, 217 medium-range, and 279 long-range) distance restraints could be obtained from PDSD, DARR, CHHC, and the recently introduced PAR and PAIN-CP solid-state experiments for the cobalt(II)-substituted catalytic domain of matrix metalloproteinase 12 (159 amino acids, 17.6 kDa). The obtained structure is a high resolution one, with backbone rmsd of 1.0 +/- 0.2 A, and is in good agreement with the X-ray structure (rmsd to X-ray 1.3 A). The proposed strategy, which may be generalized for nonmetalloproteins with the use of paramagnetic tags, represents a significant step ahead in protein structure determination using solid-state NMR.

Legend

Protein

Chemical

Disease

Primary Citation of related structures