2KO0 image
Deposition Date 2009-09-08
Release Date 2010-01-19
Last Version Date 2024-05-29
Entry Detail
PDB ID:
2KO0
Title:
Solution structure of the THAP zinc finger of THAP1 in complex with its DNA target
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
(Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
15
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:THAP domain-containing protein 1
Gene (Uniprot):THAP1
Mutations:C62S, C67S
Chain IDs:A
Chain Length:87
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Molecule:RRM1
Chain IDs:B
Chain Length:16
Number of Molecules:1
Biological Source:
Polymer Type:polydeoxyribonucleotide
Molecule:ZINC ION
Chain IDs:C
Chain Length:16
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
Structural determinants of specific DNA-recognition by the THAP zinc finger
Nucleic Acids Res. ? ? ? (2010)
PMID: 20144952 DOI: 10.1093/nar/gkq053

Abstact

Human THAP1 is the prototype of a large family of cellular factors sharing an original THAP zinc-finger motif responsible for DNA binding. Human THAP1 regulates endothelial cell proliferation and G1/S cell-cycle progression, through modulation of pRb/E2F cell-cycle target genes including rrm1. Recently, mutations in THAP1 have been found to cause DYT6 primary torsion dystonia, a human neurological disease. We report here the first 3D structure of the complex formed by the DNA-binding domain of THAP1 and its specific DNA target (THABS) found within the rrm1 target gene. The THAP zinc finger uses its double-stranded beta-sheet to fill the DNA major groove and provides a unique combination of contacts from the beta-sheet, the N-terminal tail and surrounding loops toward the five invariant base pairs of the THABS sequence. Our studies reveal unprecedented insights into the specific DNA recognition mechanisms within this large family of proteins controlling cell proliferation, cell cycle and pluripotency.

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Primary Citation of related structures