2KLR image
Deposition Date 2009-07-08
Release Date 2010-07-07
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2KLR
Keywords:
Title:
Solid-state NMR structure of the alpha-crystallin domain in alphaB-crystallin oligomers
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Alpha-crystallin B chain
Gene (Uniprot):CRYAB
Chain IDs:A, B
Chain Length:175
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Solid-state NMR and SAXS studies provide a structural basis for the activation of alphaB-crystallin oligomers.
Nat.Struct.Mol.Biol. 17 1037 1042 (2010)
PMID: 20802487 DOI: 10.1038/nsmb.1891

Abstact

The small heat shock protein alphaB-crystallin (alphaB) contributes to cellular protection against stress. For decades, high-resolution structural studies on oligomeric alphaB have been confounded by its polydisperse nature. Here, we present a structural basis of oligomer assembly and activation of the chaperone using solid-state NMR and small-angle X-ray scattering (SAXS). The basic building block is a curved dimer, with an angle of approximately 121 degrees between the planes of the beta-sandwich formed by alpha-crystallin domains. The highly conserved IXI motif covers a substrate binding site at pH 7.5. We observe a pH-dependent modulation of the interaction of the IXI motif with beta4 and beta8, consistent with a pH-dependent regulation of the chaperone function. N-terminal region residues Ser59-Trp60-Phe61 are involved in intermolecular interaction with beta3. Intermolecular restraints from NMR and volumetric restraints from SAXS were combined to calculate a model of a 24-subunit alphaB oligomer with tetrahedral symmetry.

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