2KLE image
Deposition Date 2009-07-01
Release Date 2009-07-28
Last Version Date 2024-05-29
Entry Detail
PDB ID:
2KLE
Title:
ISIC Refined Solution Structure of the Calcium Binding Domain of the C-terminal Cytosolic Domain of Polycystin-2
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
1000
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Polycystin-2
Gene (Uniprot):PKD2
Chain IDs:A
Chain Length:123
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
NMR-assignments of a cytosolic domain of the C-terminus of polycystin-2
Biomol.Nmr Assign. 3 141 144 (2009)
PMID: 19636966 DOI: 10.1007/s12104-009-9160-x

Abstact

Mutations in the PKD2 gene lead to the development of polycystic kidney disease (PKD). The PKD2 gene codes for polycystin-2, a cation channel with unknown function. The cytoplasmic, C-terminal domain interacts with a large number of proteins including mDia1, alpha-actinin, PIGEA-14, troponin, and tropomyosin. The C-terminal fragment polycystin-2 (680-796) consisting of 117 amino acids contains a putative calcium binding EF-hand. It was produced in Escherichia coli and enriched uniformly with (13)C and (15)N. The backbone and side chain resonances were assigned by multidimensional NMR methods, the obtained chemical shifts are typical for a partially folded protein. The chemical shifts obtained are in line with the existence of two paired helix-loop-helix (HLH) motifs.

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Primary Citation of related structures