2KHU image
Entry Detail
PDB ID:
2KHU
Title:
Solution Structure of the Ubiquitin-Binding Motif of Human Polymerase Iota
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2009-04-11
Release Date:
2010-02-23
Method Details:
Experimental Method:
Conformers Calculated:
40
Conformers Submitted:
25
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Immunoglobulin G-binding protein G, DNA polymerase iota
Chain IDs:A
Chain Length:108
Number of Molecules:1
Biological Source:Streptococcus sp., Homo sapiens
Ligand Molecules
Primary Citation
Unconventional Ubiquitin Recognition by the Ubiquitin-Binding Motif within the Y Family DNA Polymerases iota and Rev1.
Mol.Cell 37 408 417 (2010)
PMID: 20159559 DOI: 10.1016/j.molcel.2009.12.038

Abstact

Translesion synthesis is an essential cell survival strategy to promote replication after DNA damage. The accumulation of Y family polymerases (pol) iota and Rev1 at the stalled replication machinery is mediated by the ubiquitin-binding motifs (UBMs) of the polymerases and enhanced by PCNA monoubiquitination. We report the solution structures of the C-terminal UBM of human pol iota and its complex with ubiquitin. Distinct from other ubiquitin-binding domains, the UBM binds to the hydrophobic surface of ubiquitin centered at L8. Accordingly, mutation of L8A, but not I44A, of ubiquitin abolishes UBM binding. Human pol iota contains two functional UBMs, both contributing to replication foci formation. In contrast, only the second UBM of Saccharomyces cerevisiae Rev1 binds to ubiquitin and is essential for Rev1-dependent cell survival and mutagenesis. Point mutations disrupting the UBM-ubiquitin interaction also impair the accumulation of pol iota in replication foci and Rev1-mediated DNA damage tolerance in vivo.

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Primary Citation of related structures