2KHM image
Deposition Date 2009-04-09
Release Date 2010-04-14
Last Version Date 2024-11-20
Entry Detail
PDB ID:
2KHM
Title:
Structure of the C-terminal non-repetitive domain of the spider dragline silk protein ADF-3
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
50
Conformers Submitted:
21
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Fibroin-3
Gene (Uniprot):ADF-3
Chain IDs:A, B
Chain Length:140
Number of Molecules:2
Biological Source:Araneus diadematus
Ligand Molecules
Primary Citation
A conserved spider silk domain acts as a molecular switch that controls fibre assembly
Nature 465 239 242 (2010)
PMID: 20463741 DOI: 10.1038/nature08936

Abstact

A huge variety of proteins are able to form fibrillar structures, especially at high protein concentrations. Hence, it is surprising that spider silk proteins can be stored in a soluble form at high concentrations and transformed into extremely stable fibres on demand. Silk proteins are reminiscent of amphiphilic block copolymers containing stretches of polyalanine and glycine-rich polar elements forming a repetitive core flanked by highly conserved non-repetitive amino-terminal and carboxy-terminal domains. The N-terminal domain comprises a secretion signal, but further functions remain unassigned. The C-terminal domain was implicated in the control of solubility and fibre formation initiated by changes in ionic composition and mechanical stimuli known to align the repetitive sequence elements and promote beta-sheet formation. However, despite recent structural data, little is known about this remarkable behaviour in molecular detail. Here we present the solution structure of the C-terminal domain of a spider dragline silk protein and provide evidence that the structural state of this domain is essential for controlled switching between the storage and assembly forms of silk proteins. In addition, the C-terminal domain also has a role in the alignment of secondary structural features formed by the repetitive elements in the backbone of spider silk proteins, which is known to be important for the mechanical properties of the fibre.

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